Protein Alignment CG18599 and lms

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 183
• Identity: 52/183 - (28%)
• Similarity: 75/183 - (40%)
• Gaps: 52/183 - (28%)

  Fly   315 KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLE-- 377
            :.||.||.|:..|::.||.||||.:|:...:|..||..|:|||.|:|:||||||.||::.:..
  Fly    85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDV 149

  Fly   378 --------------------LTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAA 422
                                :...||.|..||....|.:....::.|.:||...|.....|
  Fly   150 ETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATG---- 210

  Fly   423 SPSLQEEDNEDSKHSLSLSGALPPLSRAQSESDLSICNDSLDGDSLMDGSEEA 475
            ||          ....:.||.:||                |.|.|:|:.:..|
  Fly   211 SP----------MRPYATSGGMPP----------------LPGPSVMESARNA 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	30/55 (55%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	9/20 (45%)
		Homeodomain	87..143	CDD:459649	30/55 (55%)