Protein Alignment CG18599 and Barx1

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001102350.1
• Gene: Barx1 / 364680
• RGDID: 1310884
• Length: 254
• Species: Rattus norvegicus
• Alignment Length: 162
• Identity: 53/162 - (32%)
• Similarity: 70/162 - (43%)
• Gaps: 47/162 - (29%)

  Fly   258 PHPHQAGFAAVAAAVGA----APSALQSLQQLHQQH----HAQQQATLSFQ-------------- 300
            |.|..|..||.|||.|.    ...||.:.:..| .|    .|:|.|...|.
  Rat    39 PGPKGAAPAAAAAAAGELLKFGVQALLAARPFH-SHLAVLKAEQAAVFKFPLAPLGCSGLGSALL 102

  Fly   301 ---------------------REKLK---SDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYM 341
                                 |.||:   |......|.|.:|.||:||..||..||..||:|:|:
  Rat   103 AAGPGMPGTAGTSHLPLELQLRGKLEAAGSGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYL 167

  Fly   342 VGPERLYLAHTLKLTEAQVKVWFQNRRIKWRK 373
            ..|:|:.||.:|.|::.|||.|:||||:||:|
  Rat   168 STPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	29/55 (53%)
Barx1	NP_001102350.1	Homeodomain	143..199	CDD:459649	29/55 (53%)