Protein Alignment CG18599 and Gsx2

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 273
• Identity: 78/273 - (28%)
• Similarity: 105/273 - (38%)
• Gaps: 79/273 - (28%)

  Fly   208 CYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNG------------------------ 248
            |.||:.:::......||..:|...:          :|||.|
  Rat    64 CVTSHLHSSRPPAGAGGGATGTAGA----------AVAGGGVAGGTGALPLLKSQFSPGPGDAQF 118

  Fly   249 --RYLHGGH-----QHPH----PHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQRE 302
              |..|..|     ||.|    |.|.|.||.|||..||.:|..:... |.||||...|..::.
  Rat   119 CPRVSHAHHHHHAPQHHHHHHQPQQPGSAAAAAAAAAAAAAAAAALG-HPQHHAPVCAATTYN-- 180

  Fly   303 KLKSDSHKKSAL-----------KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLT 356
              .||..:...|           ..||:||.||..||..||.||....|:....|:.:|..|.|:
  Rat   181 --VSDPRRFHCLTMGGSDTSQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLS 243

  Fly   357 EAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSA 421
            |.|||:||||||:|.:|.....::...|        ....:|:|       ||...:|..:..|.
  Rat   244 EKQVKIWFQNRRVKHKKEGKGASRNNHA--------SCKCVGSQ-------AHYARSEDEDSLSP 293

  Fly   422 ASPSLQEEDNEDS 434
            ||.:   ||.|.|
  Rat   294 ASAN---EDKEIS 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	28/55 (51%)
Gsx2	NP_001131035.2	Homeodomain	204..260	CDD:459649	28/55 (51%)