DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and unpg

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:436 Identity:99/436 - (22%)
Similarity:147/436 - (33%) Gaps:160/436 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 AAVAVSAGQSSY----QMEHQQQHHQLQQQQQQQQHHHHQQLHTHHQDGHHP-----HPPTPTTG 117
            ||..|:....||    ::.:|...|.|....:.|   |.......|:|..:|     ..|||...
  Fly   163 AAAGVAPTDLSYRRLAELMNQDYVHSLSVHARLQ---HMAAAGRMHEDQANPGMAQLQEPTPPQA 224

  Fly   118 NNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGK------SFTIAAI 176
            :     ||.:.|.||:.                     :|.|     ||||.      |....:.
  Fly   225 H-----SSPAKSGSHSP---------------------MEPA-----LDVGMDEDFECSGDSCSD 258

  Fly   177 LGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNC 241
            :.|....::||..::.|  .|......|:..|   :.:....:.:.||...|.::.         
  Fly   259 ISLTMSPRNYNGEMDKS--RNGAYTNSDSEDC---SDDEGAQSRHEGGGMGGKDSQ--------- 309

  Fly   242 DSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKS 306
                |||                                                         |
  Fly   310 ----GNG---------------------------------------------------------S 313

  Fly   307 DSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKW 371
            .|:.||    :|.||.||.|||..||.||..::|:...||..:|.:|||:|.|||:||||||.||
  Fly   314 SSNSKS----RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW 374

  Fly   372 RKHHLELTQQRLALIRQTQLPGTSL-LGNQVSVSANAAHSVSTERTNGC-SAASPSLQEEDNEDS 434
            ::....||...|.  |.....||.: :...|.|:..|..|...:....| |...|.|:::.:.::
  Fly   375 KRVKAGLTSHGLG--RNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPKPDLRKKLSAEA 437

  Fly   435 -----KHSLSLSGALP-----------------------PLSRAQS 452
                 |.|.|.:.:.|                       |||.|:|
  Fly   438 IGGFEKFSGSTNASSPSGGPVGLGVGVGVGVGVGLGVSTPLSLARS 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 31/55 (56%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 29/51 (57%)

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