DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and pnx

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_840087.1 Gene:pnx / 352939 ZFINID:ZDB-GENE-030328-42 Length:182 Species:Danio rerio


Alignment Length:118 Identity:46/118 - (38%)
Similarity:59/118 - (50%) Gaps:21/118 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 LSFQRE--KLKSDSHKKSA----------LKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYL 349
            :|..||  |..|.:.:.||          :|:||:||.||.:||..||..|:...|:...||..:
Zfish    36 ISNNRESPKTTSPTQEPSAPNIANASAAKVKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCI 100

  Fly   350 AHTLKLTEAQVKVWFQNRRIKWRKH---HLELTQQRLALIRQTQ------LPG 393
            |..|.|:|.|||:||||||.||:|.   |....|...|....||      |||
Zfish   101 ASALGLSETQVKIWFQNRRTKWKKELDGHGGEEQSHCAPTALTQNPIMYALPG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 29/55 (53%)
pnxNP_840087.1 Important for interaction with tle3a. /evidence=ECO:0000269|PubMed:12642490 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..63 7/26 (27%)
Homeodomain 68..124 CDD:459649 29/55 (53%)
Blue background indicates that the domain is not in the aligned region.

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