DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and dlx4b

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_571393.1 Gene:dlx4b / 30581 ZFINID:ZDB-GENE-990415-50 Length:254 Species:Danio rerio


Alignment Length:257 Identity:67/257 - (26%)
Similarity:104/257 - (40%) Gaps:80/257 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 NNSSPSVNNF---------NCDSVAGNGRYLH-------GGH-QH--PHPHQA-------GFAAV 268
            |:|.||.:.|         |...::|....::       ||| ||  |:|..|       |:|..
Zfish    12 NSSDPSKSAFLEFGHGLASNQQHLSGFAHNIYPVHGLHSGGHLQHDAPYPSSAPHYSRPLGYAYP 76

  Fly   269 AAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDSHKKSAL----------KNKRV---R 320
            .....|||.|....|   ..:|:...|     ..:.:..:|:|.|:          |.|::   |
Zfish    77 GPVSAAAPGAYMPYQ---PNNHSGALA-----HTRAEDTNHEKPAVIENGEIRLNGKGKKIRKPR 133

  Fly   321 TIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLAL 385
            ||::..||:.|...|::.||:..|||..||..|.||:.|||:||||:|.|::|          .:
Zfish   134 TIYSSVQLQALHQRFQQTQYLALPERADLAAKLGLTQTQVKIWFQNKRSKYKK----------IM 188

  Fly   386 IRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPL 447
            ...:..|...||                 .|:..|..||.|.:      ...:|::..:||:
Zfish   189 KHGSSGPEGELL-----------------HTSSSSPCSPGLSQ------LWEVSMANKVPPM 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 26/51 (51%)
dlx4bNP_571393.1 Homeobox 132..185 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.