DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and hoxb1b

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_571217.2 Gene:hoxb1b / 30374 ZFINID:ZDB-GENE-980526-290 Length:307 Species:Danio rerio


Alignment Length:360 Identity:87/360 - (24%)
Similarity:129/360 - (35%) Gaps:123/360 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NSSSSSNSSSHNSNSNHREQLAAAAAT------------------------ATSHAQLIEAAAAH 162
            |..|::.||........:|.|.:|.|:                        .||:|| |::...|
Zfish    11 NRGSNTYSSKVGCFPVEQEYLPSACASTNSYIPEGRPVGGNTFTSAPHETHGTSYAQ-IQSQPFH 74

  Fly   163 SSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGS-- 225
            .::|:||:.........:....||.       |.:.....||:.:.           .:.|.|  
Zfish    75 LNVDMGKTGHSNFCKQTRPPHSDYG-------HQHVLTQADDHMRL-----------QSPGFSVV 121

  Fly   226 NSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHH 290
            |.|.|..:.|.:|....||:.: .|....:..|.||..|                          
Zfish   122 NMGANIGTYSESNCRPGSVSAS-HYQSYAYGEPEPHGYG-------------------------- 159

  Fly   291 AQQQATLSFQREKLK--SDSHKKSALKN---------KR-------------------VRTIFTP 325
                   ||.:.::.  |||..|:.:|.         ||                   :||.||.
Zfish   160 -------SFSKYQVSPDSDSDSKTNIKQAPTFDWMKVKRNPPKTVKVAEYGIHGQQNIIRTNFTT 217

  Fly   326 EQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQ 390
            :||..||.||...:|:....|:.:|.||:|.|.|||:||||||:|.:|...|.|   ..:|::..
Zfish   218 KQLTELEKEFHFNKYLTRARRVEVAATLELNETQVKIWFQNRRMKQKKREKEGT---APVIKRVT 279

  Fly   391 LPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPS 425
            |         .|...||.||.|:  :.|.|..|.|
Zfish   280 L---------CSSGQNADHSTSS--SPGASPTSDS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 29/74 (39%)
hoxb1bNP_571217.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..178 7/51 (14%)
Antp-type hexapeptide 183..188 0/4 (0%)
Homeodomain 212..265 CDD:459649 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 265..307 15/53 (28%)

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