DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and hoxb4a

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:197 Identity:54/197 - (27%)
Similarity:86/197 - (43%) Gaps:58/197 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 NCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKL 304
            :||||.            |.|        ..|.|..|:             :|..:|:|.:::.:
Zfish    98 HCDSVT------------PSP--------PPACGQTPT-------------SQNTSTVSSRKDPV 129

  Fly   305 KSDSHKK----------SALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQ 359
            .....||          |..:.||.||.:|.:|:..||.||...:|:....|:.:||||.|:|.|
Zfish   130 VYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQ 194

  Fly   360 VKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHSVSTERTNGCSAASP 424
            :|:||||||:||:|.|              :||.|.:..|..|.:::...::.:.::. .|...|
Zfish   195 IKIWFQNRRMKWKKDH--------------KLPNTKIRSNSASTNSSGCPTLCSNQSR-ASGPPP 244

  Fly   425 SL 426
            ||
Zfish   245 SL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 28/55 (51%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 12/59 (20%)
Antp-type hexapeptide 130..135 0/4 (0%)
Homeodomain 152..208 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 8/50 (16%)

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