DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Nkx2-8

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001100202.1 Gene:Nkx2-8 / 299061 RGDID:1310629 Length:234 Species:Rattus norvegicus


Alignment Length:76 Identity:31/76 - (40%)
Similarity:42/76 - (55%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 SFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKV 362
            |.|...|...|....|.|.::.|.:|:..|...||..|.:|:|:..|||..||..|:||..|||:
  Rat    63 SSQLASLGRASPGSDAEKRRKRRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKI 127

  Fly   363 WFQNRRIKWRK 373
            ||||.|.|.::
  Rat   128 WFQNHRYKLKR 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 25/55 (45%)
Nkx2-8NP_001100202.1 Homeodomain 82..138 CDD:459649 25/55 (45%)

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