Protein Alignment CG18599 and Hmx3

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001099772.1
• Gene: Hmx3 / 293537
• RGDID: 1559927
• Length: 356
• Species: Rattus norvegicus
• Alignment Length: 378
• Identity: 84/378 - (22%)
• Similarity: 133/378 - (35%)
• Gaps: 122/378 - (32%)

  Fly   107 HHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGK-- 169
            ||..||.|........:.:|:.:             |||||.|.:....:|.||..:...||.
  Rat    41 HHRPPPKPQPPPRTLFAPASAAA-------------AAAAAAAAAAKGALEGAAGFALSQVGDLA 92

  Fly   170 --------------------------SFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNK- 207
                                      .:|:....|...:.:....|:   |.|::...|.|.:.
  Rat    93 FPRFEIPAQRFALPAHYLERSPAWWYPYTLTPAGGHLPRPEASEKAL---LRDSSPASGTDRDSP 154

  Fly   208 --CYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAA 270
              ...::|::...          ::.|...:.....||..|...    |...|       .|...
  Rat   155 DPLLKADPDHKEL----------DSKSPDEIILEESDSEEGKKE----GEAVP-------GAAGT 198

  Fly   271 AVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDS-HKKSALKNKRVRTIFTPEQLECLEAE 334
            .|||.                  .||...:..|..:|| .||.|.:.|:.||:|:..|:..||:.
  Rat   199 TVGAT------------------AATPGSEDWKAGADSPEKKPACRKKKTRTVFSRSQVFQLEST 245

  Fly   335 FERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKH---HLELTQQRLALIRQTQLPGTSL 396
            |:.::|:...||..||.:|.|||.|||:||||||.||::.   .||
  Rat   246 FDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELE------------------- 291

  Fly   397 LGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPLSR 449
                   :||.:|:.:..     ....|.|..| |..::.:.:.:||..|:|:
  Rat   292 -------AANLSHAAAQR-----IVRVPILYHE-NSAAEGAAAAAGAPVPVSQ 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	28/55 (51%)
Hmx3	NP_001099772.1	Homeodomain	228..284	CDD:459649	28/55 (51%)