DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and ind

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster


Alignment Length:414 Identity:107/414 - (25%)
Similarity:137/414 - (33%) Gaps:170/414 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GQPHHAALAAAAAAAVAV------------SAGQSSYQMEHQQQHHQLQQQQQQQQHHHHQQLHT 101
            |.|..:..||||.||.|:            ..|...:.:..|||    ||||||||.|       
  Fly    25 GSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGSYLFSLGIQQQ----QQQQQQQQQH------- 78

  Fly   102 HHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAA----- 161
                                                     |||||.|.:      ||||     
  Fly    79 -----------------------------------------AAAAAAAAA------AAAALQQHP 96

  Fly   162 HSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNK-CYTSNPNNNNNNNNNGGS 225
            |.|...|..:...|.| ..|:||.               .|..|.: ||.|.|.:.|        
  Fly    97 HVSSSPGSLYHPYAQL-FASKRKS---------------SGFSNYEGCYPSPPLSAN-------- 137

  Fly   226 NSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHH 290
              .|:...|.::|.....|.|.         .|.|....|.       .:|||..|....:..:.
  Fly   138 --PNSQQLPPIHNLYGSPVVGG---------LPLPEPGSFC-------TSPSASSSASLDYTNNF 184

  Fly   291 AQQQATLSFQREKLKSDSHKKSALKN--------------------KRVRTIFTPEQLECLEAEF 335
            .:.|.. .|:.|  .|.|...|.|||                    ||:||.||..||..||.||
  Fly   185 DEPQGK-RFKHE--SSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREF 246

  Fly   336 ERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQ 400
            ....|:....|:.:|:.|:|:|.|||:||||||:|.:|                        |..
  Fly   247 SHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKK------------------------GGS 287

  Fly   401 VSVSANAAHSVSTERTNGCSAASP 424
            .|.:.|    :|| .:||...|||
  Fly   288 ESPTFN----LST-NSNGSPQASP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475 26/51 (51%)
indNP_996087.2 Homeobox 231..283 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24339
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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