DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and Urad

DIOPT Version :9

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001034767.1 Gene:Urad / 231903 MGIID:3647519 Length:178 Species:Mus musculus


Alignment Length:77 Identity:22/77 - (28%)
Similarity:31/77 - (40%) Gaps:14/77 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 LLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPLSRAQSESDLSICN 460
            :.||.|......|.:|.::|        |....||.|:  |..:...|||   |:..|..|. |:
Mouse    17 VFGNIVEKCPLIAAAVWSQR--------PFSGLEDLEN--HFFAFIDALP---RSGQEGILR-CH 67

  Fly   461 DSLDGDSLMDGS 472
            ..|.|..|..|:
Mouse    68 PDLAGRDLQQGT 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeobox 320..372 CDD:278475
UradNP_001034767.1 OHCU_decarbox 10..162 CDD:286439 22/77 (29%)
Substrate binding. /evidence=ECO:0000250 84..88
Substrate binding. /evidence=ECO:0000250 119..123
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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