DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Nkx2-4

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_075993.1 Gene:Nkx2-4 / 228731 MGIID:97349 Length:354 Species:Mus musculus


Alignment Length:279 Identity:61/279 - (21%)
Similarity:101/279 - (36%) Gaps:82/279 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 PTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILG 178
            |.:|.::..::.::.....::.:.|....|||||.|.:      ||||...:..|.|        
Mouse    50 PPSGPSSQAAAVAAGMQPPHAMAGHNAAAAAAAAAAAA------AAAATYHMPPGVS-------- 100

  Fly   179 LQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDS 243
                                            ..|::...:..|||  .||....|:..:.....
Mouse   101 --------------------------------QFPHSAMGSYCNGG--LGNMGELPAYTDGMRGG 131

  Fly   244 VAGNGRYLHGGHQHP-HPHQAGFAAVAAAVGAA--------PSALQSLQQLHQQHHAQQQATLSF 299
            .|......:|.:..| :...:.|...:|.|..|        ..|.:||..||             
Mouse   132 AAAAATGWYGANTDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLAPLH------------- 183

  Fly   300 QREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWF 364
                        :|...::.|.:|:..|:..||..|::|:|:..|||.:||..:.||..|||:||
Mouse   184 ------------AAAPRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWF 236

  Fly   365 QNRRIKWRKHHLELTQQRL 383
            ||.|.|.::...:...|:|
Mouse   237 QNHRYKMKRQAKDKAAQQL 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 24/55 (44%)
Nkx2-4NP_075993.1 Homeodomain 189..245 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..329 2/11 (18%)

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