DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and ceh-16

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001379631.1 Gene:ceh-16 / 191618 WormBaseID:WBGene00000439 Length:187 Species:Caenorhabditis elegans


Alignment Length:113 Identity:39/113 - (34%)
Similarity:57/113 - (50%) Gaps:10/113 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNR 367
            |.:|.....|:.:.||.||.||.:||:.|:.||...:|:....|..|||.|.|.|:|:|:||||:
 Worm    74 KRESTGSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNK 138

  Fly   368 RIKWRKHHLELTQQRLALIRQTQLP--------GTSLLGNQVSVSANA 407
            |.|.:|....:.:.|.:.:  |..|        |..|:.....|.|.|
 Worm   139 RAKLKKSTSSVPRDRCSSV--TPNPHNHPSIHGGYQLMAQLAKVQARA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 27/55 (49%)
ceh-16NP_001379631.1 Homeodomain 88..144 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.