DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Nkx2-2

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_035049.1 Gene:Nkx2-2 / 18088 MGIID:97347 Length:273 Species:Mus musculus


Alignment Length:182 Identity:53/182 - (29%)
Similarity:83/182 - (45%) Gaps:33/182 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 AAPSALQ-SLQQLHQQHHAQQQATLSFQREKLKSDSHKK-------SALKNKRVRTIFTPEQLEC 330
            |:...|| ||..|......|..::.|.:....:|..:.|       .|.|.::.|.:|:..|...
Mouse    78 ASTEGLQYSLHGLAASAPPQDSSSKSPEPSADESPDNDKETQGGGGDAGKKRKRRVLFSKAQTYE 142

  Fly   331 LEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH----LELT----QQRLA--- 384
            ||..|.:|:|:..|||.:||..::||..|||:||||.|.|.::..    :|:|    .:|:|   
Mouse   143 LERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTPLPSPRRVAVPV 207

  Fly   385 LIR----------QTQLPGTSLLGNQVSVSANAAHSVSTERTNG--CSAASP 424
            |:|          |.....|...|  :..||.:|.|:...:.|.  .||::|
Mouse   208 LVRDGKPCHALKAQDLAAATFQAG--IPFSAYSAQSLQHMQYNAQYSSASTP 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 24/55 (44%)
Nkx2-2NP_035049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..131 6/39 (15%)
Homeodomain 129..185 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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