DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and ceh-24

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_506419.3 Gene:ceh-24 / 179877 WormBaseID:WBGene00000447 Length:299 Species:Caenorhabditis elegans


Alignment Length:225 Identity:55/225 - (24%)
Similarity:90/225 - (40%) Gaps:72/225 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 GNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAG------------FAAVAAAVGAAPSALQ 280
            |.|...|....:....:.||  |..|    |.|..:|            |||.||.:..:...::
 Worm    77 GTNAGVPGAFPYGPGRLPGN--YFAG----PFPGYSGAQPNWYNGNDPRFAAAAALLPCSIDPVR 135

  Fly   281 SLQQLHQQHHAQQQATLSFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPE 345
            |     ..:|....:::|.:|::                |.:|:..|:..||..|::.:|:..||
 Worm   136 S-----AINHQFSMSSMSQRRKR----------------RVLFSQAQVYELERRFKQAKYLTAPE 179

  Fly   346 RLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQVSVSANAAHS 410
            |..||::::||..|||:||||.|.|.:              ||.:....|.||          ||
 Worm   180 REQLANSIRLTPTQVKIWFQNHRYKCK--------------RQEKEKAMSGLG----------HS 220

  Fly   411 VSTERTNGCSAASPSLQEEDNEDSKHSLSL 440
            .        ..:||. .:.|::|.|:|:.:
 Worm   221 E--------DGSSPP-PDNDDDDDKYSIEM 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 23/55 (42%)
ceh-24NP_506419.3 Homeodomain 151..207 CDD:459649 24/85 (28%)

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