DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Msx2

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus


Alignment Length:89 Identity:38/89 - (42%)
Similarity:51/89 - (57%) Gaps:6/89 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 HKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRK 373
            ||    .|::.||.||..||..||.:|.::||:...||...:.:|.|||.|||:||||||.| .|
Mouse   139 HK----TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAK-AK 198

  Fly   374 HHLELTQQRLALIRQTQLP-GTSL 396
            ...|...::|.:..:..|| |.||
Mouse   199 RLQEAELEKLKMAAKPMLPSGFSL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 27/55 (49%)
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132
Homeodomain 143..199 CDD:459649 27/56 (48%)
Blue background indicates that the domain is not in the aligned region.

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