DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Msx1

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:121 Identity:46/121 - (38%)
Similarity:63/121 - (52%) Gaps:17/121 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 HKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRK 373
            ||    .|::.||.||..||..||.:|.::||:...||...:.:|.|||.|||:||||||.| .|
Mouse   169 HK----TNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAK-AK 228

  Fly   374 HHLELTQQRLALIRQTQLP----GTSL-LGNQVSVSANAAHSVSTERTNGCSAASP 424
            ...|...::|.:..:..||    |.|. ||...:|:|.|..|:       .||:.|
Mouse   229 RLQEAELEKLKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASL-------YSASGP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 27/55 (49%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112
PTZ00449 <99..>248 CDD:185628 34/83 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163
Homeodomain 173..229 CDD:459649 27/56 (48%)
Blue background indicates that the domain is not in the aligned region.

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