Protein Alignment CG18599 and lin-39

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 287
• Identity: 68/287 - (23%)
• Similarity: 114/287 - (39%)
• Gaps: 95/287 - (33%)

  Fly   109 PHPPTPTTGNNNNNSSSSSNSSSH------------NSNSNHREQLAAAAATA--------TSHA 153
            |....|.:.:::::|||||:|:|.            :|...:....|:||.:|        ||.:
 Worm    13 PRATAPESSSSSSSSSSSSSSTSSVGASGIPSSSELSSTIGYDPMTASAALSAHFGSYYDPTSSS 77

  Fly   154 QLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPNNNNN 218
            |:....|:...|. |..:.|     |..|...||.::..:.||..::.|||:      :..:::.
 Worm    78 QIASYFASSQGLG-GPQYPI-----LGDQSLCYNPSVTSTHHDWKHLEGDDD------DDKDDDK 130

  Fly   219 NNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQ 283
            ...:|..:..:.||                    ||..:|.                      :.
 Worm   131 KGISGDDDDMDKNS--------------------GGAVYPW----------------------MT 153

  Fly   284 QLHQQHHAQQQATLSFQREKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLY 348
            ::|        :|....|.:             ||.||.:|..|:..||.||...:|:....|:.
 Worm   154 RVH--------STTGGSRGE-------------KRQRTAYTRNQVLELEKEFHTHKYLTRKRRIE 197

  Fly   349 LAHTLKLTEAQVKVWFQNRRIKWRKHH 375
            :||:|.|||.|||:||||||:|.:|.:
 Worm   198 VAHSLMLTERQVKIWFQNRRMKHKKEN 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	28/55 (51%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	28/55 (51%)