DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18599 and LOC1281556

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_061500013.1 Gene:LOC1281556 / 1281556 VectorBaseID:AGAMI1_000208 Length:433 Species:Anopheles gambiae


Alignment Length:496 Identity:114/496 - (22%)
Similarity:144/496 - (29%) Gaps:211/496 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HNTQASGGGSGGGSSVAGLGGLGGGIHAHGQPHHAALAAAAAAAVAVSAGQSSYQMEHQQQHHQL 84
            |.....|..:.||    |:||.||.:.....|.....:..|:.:.:|                :|
Mosquito    48 HTITKQGDTTIGG----GVGGAGGAVPPGSGPGVRTPSPLASESYSV----------------RL 92

  Fly    85 QQQQQQQQHHHHQQLHTHHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATA 149
            .:.|.....|::.....       |..|....|                                
Mosquito    93 NRLQSLSPPHNYSITRL-------PESPQSLEG-------------------------------- 118

  Fly   150 TSHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKCYTSNPN 214
             |||.:....|..|.|....|.|::.            .|:.|||                ..| 
Mosquito   119 -SHASVRSLEALQSRLSPPVSHTVSP------------GAVPLSL----------------KRP- 153

  Fly   215 NNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAG----NGRYLHGGHQHPHPHQAGFAAVAA----- 270
                           .:|||.|:........|    .|....||...|..|.||...|..     
Mosquito   154 ---------------RSSSPPVSPPPPPPATGVVGLGGGPQGGGGPVPPAHPAGPIVVPGLPPGL 203

  Fly   271 -----------AVGAAPS-------ALQSL----------QQLHQQHH--AQ-QQATLSFQREKL 304
                       |.||.|:       .|:||          |..|.||.  || |.|.|:..:...
Mosquito   204 VRPFPVSPSQHAPGAHPAQPGGPQPELKSLPPFLHTPEMVQAAHNQHFLAAQFQAAALAHAQAGQ 268

  Fly   305 KSDSHKKSA----------------------------------------LKNKRVRTIFTPEQLE 329
            ....|..:|                                        .|:|||||.|:|.||.
Mosquito   269 PFPPHPAAAHLHNPNMPPRDSYPLYPWLLSRHGRGVFPIGFPGNYLIPFRKSKRVRTAFSPSQLL 333

  Fly   330 CLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGT 394
            .||..||...|:||.||..||..|.|:|.||||||||||.|.:              |..|..|.
Mosquito   334 KLEHAFESNHYVVGAERKQLAQNLNLSETQVKVWFQNRRTKHK--------------RMQQEEGG 384

  Fly   395 SLLGNQVSVSANAAHSVSTERTNGCSAASP--SLQEEDNED 433
            |..|.    |.:..|       ...||:||  |..|||:||
Mosquito   385 SGSGK----STDGDH-------QNRSASSPTGSCDEEDDED 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 34/55 (62%)
LOC1281556XP_061500013.1 None

Return to query results.
Submit another query.