DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and Scr

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:XP_311616.2 Gene:Scr / 1272726 VectorBaseID:AGAMI1_014121 Length:372 Species:Anopheles gambiae


Alignment Length:390 Identity:106/390 - (27%)
Similarity:153/390 - (39%) Gaps:118/390 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NTQASGGGSGGG----SSVAGLGGLGGGIHAHGQPHHA--------ALAAAAAAAV------AVS 67
            ||..|.||...|    |:.|      ..|:. |.||.|        .||.|.|.:|      ||.
Mosquito    33 NTAGSQGGQNDGYFPPSTYA------PNIYP-GTPHQAHYSPQSYNPLAGAGATSVNSASTGAVG 90

  Fly    68 AG-QSSYQMEHQQQHHQ--LQQQQQQQQHHHHQQLHTHHQDGHHPHPPTPTTG----NNNNNSSS 125
            .| ||:..:::.|...|  |..||||.|.....|...:..:|       |:||    |||||:|:
Mosquito    91 GGHQSTDMVDYTQLQPQKFLLSQQQQPQSALTSQSCKYASEG-------PSTGTNVINNNNNNST 148

  Fly   126 SS---------NSSSHNSNSNHREQLAAAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILGLQS 181
            :|         .||..|..:|.|.::    :...|...::|:.:  .||..|...|..      |
Mosquito   149 TSPQDLSTASGGSSGANDGNNGRPEI----SPKLSPGSVVESVS--RSLKSGNPSTAV------S 201

  Fly   182 QRKDYNNAINLSLHDNNNI-IGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVA 245
            .....||..|:|..:..|: :.....:...|    ::::...|||:.|...||..          
Mosquito   202 SSSTNNNTSNISNRNQVNLPLASPEEESEAS----DDDSGTEGGSSQGGGGSSSK---------- 252

  Fly   246 GNGRYLHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQREKLKSDSHK 310
                  .||   |.||                ....::::|     ..|:|::...|        
Mosquito   253 ------KGG---PPPH----------------IYPWMKRVH-----IGQSTVNANGE-------- 279

  Fly   311 KSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH 375
                 .||.||.:|..|...||.||...:|:....|:.:||.|.|||.|:|:||||||:||:|.|
Mosquito   280 -----TKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEH 339

  Fly   376  375
            Mosquito   340  339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 28/55 (51%)
ScrXP_311616.2 None

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