Protein Alignment CG18599 and hoxc3

DIOPT Version :10

• Sequence 1: NP_650701.1
• Gene: CG18599 / 42191
• FlyBaseID: FBgn0038592
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: XP_002936696.1
• Gene: hoxc3 / 100190990
• XenbaseID: XB-GENE-5997986
• Length: 394
• Species: Xenopus tropicalis
• Alignment Length: 343
• Identity: 78/343 - (22%)
• Similarity: 125/343 - (36%)
• Gaps: 91/343 - (26%)

  Fly   186 YNNAINL---SLHDNNNI--IG-------DDNNKCYTSNPNNNNNNNNNGGSNS----------- 227
            |:|:.:.   ....||.:  :|       ||....:...|:..|.:.::.|.:|
 Frog     9 YDNSASFGGCGFQGNNGMGYLGQQDYPSEDDYQPPFCLPPDTANGSASHKGEHSIKGIDFHLSEV 73

  Fly   228 ---GNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAA--AVGAAPSALQSLQQLHQ 287
               .....||     |.||              |.|..|...:..:  :.|...|.:.|..:..:
 Frog    74 SEQAQQPKSP-----NSDS--------------PLPKSASTQSCTSKKSTGPVSSDVTSPNKKSK 119

  Fly   288 QHHAQQQATLSFQREKLKSDSHKKSA----------------LKNKRVRTIFTPEQLECLEAEFE 336
            ..:..:| ...:.:|..::...||.|                ..:||.||.:|..||..||.||.
 Frog   120 GSNMPKQ-IFPWMKETRQNSKQKKQAPPPADDAPAVDSSFLSSASKRARTAYTNSQLVELEKEFH 183

  Fly   337 RQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH-----------LELTQQRLALIRQTQ 390
            ..:|:..|.||.:|..|.|:|.|:|:||||||:|::|.|           |..:.....:.....
 Frog   184 FNRYLCRPRRLEMAKLLNLSERQIKIWFQNRRMKFKKDHKGKGGGGSPGGLSPSSSPSLMPYSGN 248

  Fly   391 LPGTSLLGNQVSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHS-LSLSGALPPLSRAQSES 454
            ||.....|.:|.: |..|::.|.....|.:|.|..|.|..:...::. .||:....|
 Frog   249 LPLDGDCGYEVPM-ATGAYNKSPGNMYGLTAYSAPLFEGPSAQKRYGPQSLAPEYDP-------- 304

  Fly   455 DLSICNDSLDGDSLMDGS 472
                  .|:.||:..|.|
 Frog   305 ------HSMQGDNNYDTS 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18599	NP_650701.1	Homeodomain	317..373	CDD:459649	28/55 (51%)
hoxc3	XP_002936696.1	Homeodomain	164..220	CDD:459649	28/55 (51%)
		DUF4074	335..392	CDD:463833