DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18599 and bsx

DIOPT Version :10

Sequence 1:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001095280.1 Gene:bsx / 100124316 XenbaseID:XB-GENE-995770 Length:229 Species:Xenopus tropicalis


Alignment Length:218 Identity:62/218 - (28%)
Similarity:86/218 - (39%) Gaps:71/218 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 PHPHQAGFAAVAAAVGAAPSALQSLQQLHQ--QHHAQQQATLS------FQREKLKSDSHKKSAL 314
            ||||                     ..||:  .||....||..      |.........|    .
 Frog    64 PHPH---------------------HPLHKPDHHHPFFLATSGLPVPALFPHHSELPGKH----C 103

  Fly   315 KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHHLELT 379
            :.::.||:|:..||..||..||.|:|:..|||:.||..|.|:|.|||.||||||:|.:|.     
 Frog   104 RRRKARTVFSDSQLSGLEKRFELQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQ----- 163

  Fly   380 QQRLALIRQTQ-LPGTSLLGNQVSVSANAAHS---VSTERTNGCSAASPSLQEEDNEDSKHSLSL 440
                  :|:|| .|.|::..|.:..|::...|   ..|||..|.|               .:|.|
 Frog   164 ------LRKTQDDPKTAMSDNHLDHSSSETESGDPNGTERAKGGS---------------QNLFL 207

  Fly   441 SGALPPLSRAQSESDLSICNDSL 463
                    |.::|.::.|..|.|
 Frog   208 --------RDEAEDEVDIIEDDL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 29/55 (53%)
bsxNP_001095280.1 Homeodomain 106..162 CDD:459649 29/55 (53%)

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