DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7156 and snx13

DIOPT Version :9

Sequence 1:NP_650697.1 Gene:CG7156 / 42187 FlyBaseID:FBgn0038588 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_021323912.1 Gene:snx13 / 503733 ZFINID:ZDB-GENE-050306-12 Length:966 Species:Danio rerio


Alignment Length:522 Identity:98/522 - (18%)
Similarity:159/522 - (30%) Gaps:208/522 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VKRLHRELSRRHKSLQLPGKLPVPTDSTYFKRFDAAVIQRRKEYILQLLDFAAQHPALYKCSTFT 118
            |.||.::|::..         |.|      :.||.  |||:      :.|...:|...|..    
Zfish   467 VTRLAQKLNKED---------PTP------EIFDE--IQRK------VYDMMLKHEHYYPS---- 504

  Fly   119 QFFQETPSPNGSPLKKLYV----------ERSLRLQTEDNGCGSGGSETGT--------CAGAI- 164
              |::.|         |||          |.|.|...:.:|....||.||:        .:|:: 
Zfish   505 --FRQHP---------LYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLSSGSVD 558

  Fly   165 ------ADICDKLDLPYDPHDAGGITPLDPRCDKEQTNNESQAKETEIELETKQEPKTDVALTKR 223
                  |.|.|..|...:|....|:      |:   .:.::.|..|...:....:...|...|.|
Zfish   559 ESVQLHAFISDTADAFLNPLPVAGV------CN---DHGKTYALYTITVIRKNSDGSEDTWKTYR 614

  Fly   224 DYLRLLTPMASIESDDSDYIYEAALEFSHAVQAEVNLEYAEAHERYKHGVDLLLNGAKQDSSEER 288
            .|           ||..|:......:|......                  |.|.|.|..::.:|
Zfish   615 RY-----------SDFHDFHMRITEQFESLAPI------------------LKLPGKKTFNNMDR 650

  Fly   289 RFIAKAK-----IAKYLARAEEIHA---------NFLANDCPTK-KLQFQLSLDTTDGGSVSHLE 338
            .|:.|.|     ..:.|...|.:.|         :||.|...:| |.:|...:||          
Zfish   651 EFLEKRKKDLNAYLQLLLNPEMVKACPILMPYVYDFLENKAYSKGKREFARKMDT---------- 705

  Fly   339 CPWNQLARYKVLQILQDRVMQVQCVTKSQQPAAIMKGVEKPAS----------HSLTQSIFLPQQ 393
                      .:..|:..:..|....|| .|.::.:||.|.::          ..:.||||   :
Zfish   706 ----------FVNPLRSSMRNVSNAVKS-LPDSLAEGVSKVSADMGRMSEKLGQDIKQSIF---K 756

  Fly   394 VPYMVQLLAYFQSEQKIFLLLRQAEGGMLYDYLQSYTPTSSKSVNYGELFPSDQEPE--EKEAEE 456
            ||.::|                                            .||.:||  ...|:.
Zfish   757 VPPLIQ--------------------------------------------KSDIDPEHCRVSAQL 777

  Fly   457 PPLTSDS-----------DVSDLVRSSQQLLKSVTNTLSNLQAGVVTPKRNKKVDQNRIRSKPIP 510
            .....|:           :|.||...:|.|.:::.|.|..|.........|:|: .:.:.:...|
Zfish   778 DDNVDDNIPLRVMLLLMDEVFDLKDRNQWLRRNIKNLLQQLIKATYGDTINRKI-VDHVDNMTSP 841

  Fly   511 EQ 512
            ||
Zfish   842 EQ 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7156NP_650697.1 PX_SNX15_like 8..124 CDD:132791 15/69 (22%)
MIT_SNX15 241..315 CDD:239140 16/87 (18%)
PKc_like 343..665 CDD:304357 34/193 (18%)
snx13XP_021323912.1 PXA 98..284 CDD:321992
RGS 378..513 CDD:321993 18/83 (22%)
PX_SNX13 559..690 CDD:132783 30/168 (18%)
Nexin_C 806..915 CDD:312222 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.