DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and mdh

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_417703.1 Gene:mdh / 947854 ECOCYCID:EG10576 Length:312 Species:Escherichia coli


Alignment Length:312 Identity:180/312 - (57%)
Similarity:221/312 - (70%) Gaps:4/312 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVTVCGAAGGIGQPLSLLLK-QNPLVTDLALYDIVH-TPGVAADLSHIDTKSKTAGFIGADQLGD 88
            ||.|.||||||||.|:|||| |.|..::|:||||.. |||||.|||||.|..|..||.|.|.. .
E. coli     2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-P 65

  Fly    89 SLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVPIAAE 153
            :|:|:|||:|.|||.|||||.|.|||||||||:|::...:||.||||.:.||||||||.|.||||
E. coli    66 ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAE 130

  Fly   154 ILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGGHSGVTILPVLSQSQPLFKG 218
            :||||||||..:||||:|||::|:..|:....|..|..|::|||||||||||||:||| .|....
E. coli   131 VLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQ-VPGVSF 194

  Fly   219 NQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLKGLNGEKNVIECSYVQSTVT 283
            .:..:..||.|||.||||||:||||.|||||||..|.|||..||::.|.||:.|:||:||:....
E. coli   195 TEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQ 259

  Fly   284 EATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELKKNIQKGIDFAN 335
            .|.|||.||:||||||:|...:..|:.:|:..||..:..|||:|..|.:|.|
E. coli   260 YARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVN 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 178/309 (58%)
mdhNP_417703.1 MDH_glyoxysomal_mitochondrial 1..310 CDD:133422 178/309 (58%)

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