DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and MDH3

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_010205.1 Gene:MDH3 / 851481 SGDID:S000002236 Length:343 Species:Saccharomyces cerevisiae


Alignment Length:337 Identity:149/337 - (44%)
Similarity:213/337 - (63%) Gaps:32/337 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAGFIGADQLGDSL 90
            ||.:.||:||:|||||||||.:|.|::||||||....|:..|||||:|.|...|: ..|.:.::|
Yeast     3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTL 66

  Fly    91 KGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVPIAAEIL 155
            ..:.||:||||||||||:||||||.:||||:|.:..::.|..|.|.:.:|:||||:.||||.|.|
Yeast    67 SNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKFAPNARILVISNPVNSLVPIAVETL 131

  Fly   156 KKAGVYDPKRLFGVSTLDVVRARAFIGHALGV---------DPQTV--QIPVIGGHSGVTILPVL 209
            ||.|.:.|..:.||:.||:|||..|:...|.:         |..|:  ::.|||||||.||:|::
Yeast   132 KKMGKFKPGNVMGVTNLDLVRAETFLVDYLMLKNPKIGQEQDKTTMHRKVTVIGGHSGETIIPII 196

  Fly   210 SQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLKGLNGEKNVIE 274
            :....:|:.::. .|....|:|..|.|:||||.||||||||||:|||:||..:|:..:.||...|
Yeast   197 TDKSLVFQLDKQ-YEHFIHRVQFGGDEIVKAKQGAGSATLSMAFAGAKFAEEVLRSFHNEKPETE 260

  Fly   275 --CSYV-----------QSTVTEAT--FFSTPLVLGKNGVQENLG---LPKLNDYEKKLLEAAIP 321
              .::|           |..|.:.:  :||.|:|| :||...::.   |.||:..|::|:..|:.
Yeast   261 SLSAFVYLPGLKNGKKAQQLVGDNSIEYFSLPIVL-RNGSVVSIDTSVLEKLSPREEQLVNTAVK 324

  Fly   322 ELKKNIQKGIDF 333
            ||:|||:||..|
Yeast   325 ELRKNIEKGKSF 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 149/337 (44%)
MDH3NP_010205.1 MDH_euk_gproteo 3..339 CDD:130833 149/337 (44%)

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