DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and AT5G58330

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_851214.1 Gene:AT5G58330 / 835945 AraportID:AT5G58330 Length:443 Species:Arabidopsis thaliana


Alignment Length:359 Identity:78/359 - (21%)
Similarity:135/359 - (37%) Gaps:110/359 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VTVCGAAG----------------GIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLS------ 69
            :.|.||||                |..||::|.|    |.::.::..:   .|||.:|.      
plant   102 IAVSGAAGMISNHLLFKLASGEVFGPDQPIALKL----LGSERSIQAL---EGVAMELEDSLFPL 159

  Fly    70 --HIDTKSKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNC 132
              .:|        ||.|. .:..:..:..::....||.|||.|.||.::|..|..:...::.|..
plant   160 LREVD--------IGTDP-NEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAA 215

  Fly   133 -PKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTV-QIP 195
             |...|.::.||.||...|.   ||.|.....|....::.||..||:..:....||....| .:.
plant   216 SPNVKVLVVGNPCNTNALIC---LKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMT 277

  Fly   196 VIGGHS-------------GVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVK-AKAGAGS 246
            :.|.||             |:.:..|::..:.|.:|..::::|      ..|..:.| .::.|.|
plant   278 IWGNHSTTQVPDFLNARINGLPVKEVITDHKWLEEGFTESVQK------RGGLLIQKWGRSSAAS 336

  Fly   247 ATLSMAYAGARFAGSLLKGLNGEKNVIECSYVQSTVT---EATFFSTPLVLGKN--GVQENL--G 304
            ..:|:..|                       ::|.||   |..:|||.:....|  |::|.|  .
plant   337 TAVSIVDA-----------------------IKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFS 378

  Fly   305 LP---------------KLNDYEKKLLEAAIPEL 323
            :|               :::||.::.:..:..||
plant   379 MPCRSKGDGDYELVKDVEIDDYLRQRIAKSEAEL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 78/359 (22%)
AT5G58330NP_851214.1 PLN00112 1..443 CDD:215060 78/359 (22%)

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