DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and c-NAD-MDH2

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_199147.1 Gene:c-NAD-MDH2 / 834351 AraportID:AT5G43330 Length:332 Species:Arabidopsis thaliana


Alignment Length:351 Identity:88/351 - (25%)
Similarity:142/351 - (40%) Gaps:86/351 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVTVCGAAGGIGQPL-------SLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAGF--- 80
            :|.|.||||.||..|       .:|....|::  |.:.||   |..|..|:.:..:...|.|   
plant     7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVI--LHMLDI---PFAAEALNGVKMELVDAAFPLL 66

  Fly    81 ---IGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKN-CPKALVAIIT 141
               :......::..|.:|.|:..|.|||.||.|.|:.:.|..|.|..::::.|: .|...|.::.
plant    67 KGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVA 131

  Fly   142 NPVNTCVPIAAEILKKAGVYDP-KRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGGHSGVTI 205
            ||.||    .|.|||:.....| |.:..::.||..||...:...|.|....|:..:|.|:...|.
plant   132 NPANT----NALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQ 192

  Fly   206 LPVLSQS-----------QPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFA 259
            .|.::.:           :.|.|.::....:....:|:.|..::||:      .||.|.:.|..|
plant   193 YPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKAR------KLSSALSAASSA 251

  Fly   260 GSLLKGLNGEKNVIECSYVQSTVT---EATF------------------FSTPLVLGKNG----V 299
                           |.:::..|.   |.||                  :|.| |..:||    |
plant   252 ---------------CDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFP-VTCRNGEWTIV 300

  Fly   300 QENLGLPKLNDYEKKLLEAAIPELKK 325
            |   ||| ::|..:|.::....|||:
plant   301 Q---GLP-IDDASRKKMDLTAEELKE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 88/351 (25%)
c-NAD-MDH2NP_199147.1 PLN00135 24..332 CDD:177744 79/334 (24%)

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