DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and mMDH2

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_188120.1 Gene:mMDH2 / 820731 AraportID:AT3G15020 Length:341 Species:Arabidopsis thaliana


Alignment Length:326 Identity:202/326 - (61%)
Similarity:256/326 - (78%) Gaps:2/326 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QGV--RTFSVGQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTK 74
            ||:  |.|:.....:.||.:.|||||||||||||:|.||||:.|:||||.:|||||||:.||:|:
plant    15 QGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTR 79

  Fly    75 SKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139
            |:.:|::|.|.||.:|:|:|:|:||||||||||||||||||:||||:|::|.:|||.||:|||.:
plant    80 SQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNM 144

  Fly   140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGGHSGVT 204
            |:||||:.|||||||.||||.||.|:||||:||||||||.|......|:...|.:||:|||:|:|
plant   145 ISNPVNSTVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGIT 209

  Fly   205 ILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLKGLNGE 269
            |||:.||:.|....:.|.|..||.|.|:.|||||:||||.||||||||||||.||.:.||||||.
plant   210 ILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGV 274

  Fly   270 KNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELKKNIQKGIDFA 334
            .||:|||:||||:||..||::.:.||||||:|.|.|..|:|:||:.|||...|||.:|:|||.||
plant   275 PNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFA 339

  Fly   335 N 335
            |
plant   340 N 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 195/308 (63%)
mMDH2NP_188120.1 PLN00106 14..334 CDD:215058 196/318 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 211 1.000 Domainoid score I789
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55938
Inparanoid 1 1.050 397 1.000 Inparanoid score I477
OMA 1 1.010 - - QHG56560
OrthoDB 1 1.010 - - D976445at2759
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 1 1.000 - - otm3098
orthoMCL 1 0.900 - - OOG6_101212
Panther 1 1.100 - - O PTHR11540
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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