DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and Mdh1b

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_036010132.1 Gene:Mdh1b / 76668 MGIID:1923918 Length:501 Species:Mus musculus


Alignment Length:102 Identity:23/102 - (22%)
Similarity:39/102 - (38%) Gaps:19/102 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAGFIGADQLGD 88
            ||:..|.|..|.....|||:..:..:..     :.|.|..:.:     .|..:..|.:.|..:..
Mouse   329 NYESAVKGPPGHYHSVLSLIFDREWITK-----EFVQTLKILS-----STGKQFGGILAAHSIAT 383

  Fly    89 SLK----GSDVVVIPAGVPRKPGMTRDDLFNVNAGII 121
            :||    ||     |.|.....|:..:..|::..||:
Mouse   384 TLKYWYHGS-----PPGEIVSLGVMSEGQFDIPEGIV 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 22/101 (22%)
Mdh1bXP_036010132.1 NADB_Rossmann 9..459 CDD:419666 23/102 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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