DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and Uevld

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_008757683.1 Gene:Uevld / 691172 RGDID:1587416 Length:470 Species:Rattus norvegicus


Alignment Length:362 Identity:73/362 - (20%)
Similarity:125/362 - (34%) Gaps:104/362 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKQVTKQLALQGVRTFSVGQQNNY------KVTVCGAAGGIGQPLSLLLKQNPLVTDLAL---- 55
            :|..:||  ..:||...:.....|:      |:||.| :|.:|...:|.:....:...|.|    
  Rat   155 LLAYITK--ITEGVSDINSRGWTNHENKIPNKITVVG-SGDLGIACTLAISAKGIADKLLLLDLS 216

  Fly    56 ---------YDIVHTPGV--AADLSHIDTKSKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMT 109
                     .||.:.|.|  :.||| ....||...|     ..:||.||:..:            
  Rat   217 DGTNQGTMDLDIFNLPNVEISKDLS-ASAHSKVVIF-----TANSLGGSESYL------------ 263

  Fly   110 RDDLFNVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVS-TLD 173
              .....|..:.:.:..::......|::.:.:.||.    |.:.:..|...:...|:.|:. .||
  Rat   264 --HAVQSNVDMFRALVPALGHYSQHAVLLVASQPVE----IMSYVTWKLSTFPAARVMGIGCNLD 322

  Fly   174 VVRARAFIGHALGVDPQTVQIPVIG-----------GHSGVTILPVLSQSQPLFKGNQDTIEKLT 227
            ..|.:..|...|.......::.|:|           |..||  :...||:|              
  Rat   323 SQRLQYIISSVLKAQTSGKEVWVVGEQGENKVCSWSGQDGV--MSPSSQAQ-------------- 371

  Fly   228 VRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLKGLNGEKNVIECSYVQSTVTEA------- 285
              :......::|.|   |..:.|:..:.|....::   :|.:|.|    :..||:.:.       
  Rat   372 --LSSRAMGLLKVK---GQRSWSVGLSVADLLDTI---INNKKKV----HSVSTLAKGYYGLDNE 424

  Fly   286 TFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPE 322
            .|.|.|.:||.:||.|.|         |...|.|:.|
  Rat   425 VFLSLPCILGTSGVSEVL---------KTAAEDAVTE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 67/338 (20%)
UevldXP_008757683.1 UEV 21..138 CDD:283415
NADB_Rossmann 180..467 CDD:304358 67/335 (20%)
L-LDH-NAD 187..461 CDD:273796 65/328 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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