DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and mdh2

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001011412.1 Gene:mdh2 / 496892 XenbaseID:XB-GENE-971714 Length:338 Species:Xenopus tropicalis


Alignment Length:333 Identity:197/333 - (59%)
Similarity:261/333 - (78%) Gaps:0/333 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKQVTKQLALQGVRTFSVGQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVA 65
            |..::.:..:...:|..|...|.|.:|.|.||:||||||||||||.:||:::|.||||.||||||
 Frog     1 MFSRIARPASHGLIRGLSTTAQANARVAVLGASGGIGQPLSLLLKNSPLISNLTLYDIAHTPGVA 65

  Fly    66 ADLSHIDTKSKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAK 130
            ||||||:|::|..|::||:||.:||||:|||||||||||||||||||||..||.|:..::.:.||
 Frog    66 ADLSHIETRAKVTGYLGAEQLPESLKGADVVVIPAGVPRKPGMTRDDLFTTNASIVATLTEACAK 130

  Fly   131 NCPKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIP 195
            :||:|::.||:||||:.:||.:|:.||.|||:|..:|||:|||:|||..|:....|:||..|.:|
 Frog   131 HCPEAMICIISNPVNSTIPITSEVFKKHGVYNPNHIFGVTTLDIVRANTFVAELKGLDPARVNVP 195

  Fly   196 VIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAG 260
            |:|||:|.||:|::|||.|..:..||.:|.|..|||:||||||||||||||||||||||||||..
 Frog   196 VVGGHAGKTIIPLISQSTPKVEFPQDQLEALIPRIQDAGTEVVKAKAGAGSATLSMAYAGARFVF 260

  Fly   261 SLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELKK 325
            |||..:||::.|||||:|:|..||:.:|||||:|||||:::||||.||..:|:||:..|:.|||.
 Frog   261 SLLDAMNGKEGVIECSFVRSEETESPYFSTPLLLGKNGIEKNLGLGKLTAFEEKLVSEAMGELKA 325

  Fly   326 NIQKGIDF 333
            :|:||.||
 Frog   326 SIKKGEDF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 192/309 (62%)
mdh2NP_001011412.1 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 192/308 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2890
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55938
Inparanoid 1 1.050 407 1.000 Inparanoid score I1845
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 1 1.000 - - oto104642
Panther 1 1.100 - - LDO PTHR11540
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R700
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.190

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