DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and MDH2

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_005909.2 Gene:MDH2 / 4191 HGNCID:6971 Length:338 Species:Homo sapiens


Alignment Length:333 Identity:199/333 - (59%)
Similarity:258/333 - (77%) Gaps:0/333 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKQVTKQLALQGVRTFSVGQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVA 65
            ||..:.:..:....|:||...|||.||.|.||:||||||||||||.:|||:.|.||||.||||||
Human     1 MLSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA 65

  Fly    66 ADLSHIDTKSKTAGFIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAK 130
            ||||||:||:...|::|.:||.|.|||.||||||||||||||||||||||.||.|:..::.:.|:
Human    66 ADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQ 130

  Fly   131 NCPKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIP 195
            :||:|::.:|.||||:.:||.||:.||.|||:|.::|||:|||:|||..|:....|:||..|.:|
Human   131 HCPEAMICVIANPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVP 195

  Fly   196 VIGGHSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAG 260
            |||||:|.||:|::||..|.....||.:..||.||||||||||||||||||||||||||||||..
Human   196 VIGGHAGKTIIPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVF 260

  Fly   261 SLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELKK 325
            ||:..:||::.|:|||:|:|..||.|:|||||:|||.|:::|||:.|::.:|:|::..||||||.
Human   261 SLVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMISDAIPELKA 325

  Fly   326 NIQKGIDF 333
            :|:||.||
Human   326 SIKKGEDF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 191/309 (62%)
MDH2NP_005909.2 MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 191/308 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150893
Domainoid 1 1.000 200 1.000 Domainoid score I3047
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55938
Inparanoid 1 1.050 410 1.000 Inparanoid score I1877
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56560
OrthoDB 1 1.010 - - D366623at33208
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 1 1.000 - - oto90853
orthoMCL 1 0.900 - - OOG6_101212
Panther 1 1.100 - - LDO PTHR11540
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R700
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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