DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and LDHC

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_002292.1 Gene:LDHC / 3948 HGNCID:6544 Length:332 Species:Homo sapiens


Alignment Length:338 Identity:96/338 - (28%)
Similarity:146/338 - (43%) Gaps:47/338 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QQNNYKVTVCG-AAGGIGQPLSLLLKQNPLVTDLALYDIV--HTPGVAADLSH----IDTKSKTA 78
            :.:..|:|:.| .|.|:...:|:|||.  |..:|||.|:.  ...|...||.|    ..|...|:
Human    17 ENSQCKITIVGTGAVGMACAISILLKD--LADELALVDVALDKLKGEMMDLQHGSLFFSTSKITS 79

  Fly    79 G---FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAII 140
            |   .:.|:        |.:|::.||..::.|.||..|...|..|:|.|..:|....|...:.::
Human    80 GKDYSVSAN--------SRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYSPDCKILVV 136

  Fly   141 TNPVNTCVPIAAEILKKAGVYDPKRLFGVS-TLDVVRARAFIGHALGVDPQTVQIPVIGGH---- 200
            :|||:    |...|:.|.......|:.|.. .||..|.|..||..|||.|.:....:||.|    
Human   137 SNPVD----ILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHGDSS 197

  Fly   201 ----SGVTILPV-LSQSQPLFKGNQD-----TIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAG 255
                |||.:..| |....|....:.|     .|.|   ::.::..|::|.|   |..:.::..:.
Human   198 VPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHK---QVIQSAYEIIKLK---GYTSWAIGLSV 256

  Fly   256 ARFAGSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAI 320
            ....||:||.|.....|.........:.|..|.|.|.|||:|||.:.:.: .||..|:.|.:.: 
Human   257 MDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKI-NLNSEEEALFKKS- 319

  Fly   321 PELKKNIQKGIDF 333
            .|...||||.:.|
Human   320 AETLWNIQKDLIF 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 96/334 (29%)
LDHCNP_002292.1 LDH_1 18..329 CDD:133429 94/332 (28%)

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