DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and CG13334

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001246301.1 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster


Alignment Length:325 Identity:87/325 - (26%)
Similarity:124/325 - (38%) Gaps:56/325 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVH--TPGVAADLSHIDTKSKTAGFIGADQLGD 88
            |::|.| ||.:|..:|.:|....|..:|.:.||.:  ....|.|..|.......|..:   ..||
  Fly    50 KISVVG-AGQVGTAISAMLLLRNLTKNLVILDINYELAKAEALDFQHASAFLSDARVV---PCGD 110

  Fly    89 SL--KGSDVVVIPAGVPRKPGMTRDDL--FNVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVP 149
            |.  |.||||:|.||. |..|..|..|  ......|:|.....:.:..|.|...||:||.:....
  Fly   111 STNSKDSDVVIITAGA-RPSGKDRSRLAAMQKTVEILKKAVPKLVELSPNATFIIISNPADVMTY 174

  Fly   150 IAAEILKKAGVYDPK-RLFGVST-LDVVRARAFIGHALGVDPQTVQIPVIGGHSGVTILPVLSQS 212
            ....|...     || |.|.... ||.||.|..|.:.|.:.|..|...|||.| |.:.:||.|..
  Fly   175 AVQRITNL-----PKHRCFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVIGEH-GASAVPVWSSV 233

  Fly   213 QPLFKGNQDTIE------------KLTVRIQEAGTEVVKAKA------GAGSATLSMAYAGAR-- 257
            ........|.::            |:..::...|..|.|.|.      ....|.:..|.:|.:  
  Fly   234 SIAGIRLNDVVKNLACGDDPENWAKINKQVTTGGLAVAKTKGYTNWAIALTCADIVQAMSGGKGK 298

  Fly   258 --FAGSLLKGLNG-EKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAA 319
              ..|:.:||||| :.||:              .|.|.::...|:.....||..:..:.|||.:|
  Fly   299 IACVGTDMKGLNGIQDNVV--------------LSLPCLVTAGGISHVFELPLTDVEQSKLLASA 349

  Fly   320  319
              Fly   350  349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 87/325 (27%)
CG13334NP_001246301.1 LDH_1 46..358 CDD:133429 87/325 (27%)
L-LDH-NAD 53..354 CDD:273796 86/322 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452294
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0039
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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