DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and Mdh2

DIOPT Version :9

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_032643.2 Gene:Mdh2 / 17448 MGIID:97050 Length:338 Species:Mus musculus


Alignment Length:319 Identity:199/319 - (62%)
Similarity:252/319 - (78%) Gaps:0/319 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RTFSVGQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAG 79
            |:||...|||.||.|.||:||||||||||||.:|||:.|.||||.||||||||||||:|::...|
Mouse    15 RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKG 79

  Fly    80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAIITNPV 144
            ::|.:||.|.|||.||||||||||||||||||||||.||.|:..::.:.|::||:|:|.||.|||
Mouse    80 YLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMVCIIANPV 144

  Fly   145 NTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGGHSGVTILPVL 209
            |:.:||.||:.||.|||:|.::|||:|||:|||..|:....|:||..|.:||||||:|.||:|::
Mouse   145 NSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLI 209

  Fly   210 SQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLKGLNGEKNVIE 274
            ||..|.....||.:..||.||||||||||||||||||||||||||||||..||:..:||::.|:|
Mouse   210 SQCTPKVDFPQDQLATLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVE 274

  Fly   275 CSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAIPELKKNIQKGIDF 333
            ||:|||..||.|:|||||:|||.|:::|||:.|:..:|:|::..||||||.:|:||.||
Mouse   275 CSFVQSKETECTYFSTPLLLGKKGLEKNLGIGKITPFEEKMIAEAIPELKASIKKGEDF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 193/309 (62%)
Mdh2NP_032643.2 MDH_euk_gproteo 26..335 CDD:130833 193/308 (63%)
MDH_glyoxysomal_mitochondrial 26..334 CDD:133422 193/308 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841002
Domainoid 1 1.000 200 1.000 Domainoid score I3049
eggNOG 1 0.900 - - E1_COG0039
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55938
Inparanoid 1 1.050 410 1.000 Inparanoid score I1851
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56560
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001716
OrthoInspector 1 1.000 - - oto94436
orthoMCL 1 0.900 - - OOG6_101212
Panther 1 1.100 - - LDO PTHR11540
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R700
SonicParanoid 1 1.000 - - X1106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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