DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mdh2 and MDH1B

DIOPT Version :10

Sequence 1:NP_650696.1 Gene:Mdh2 / 42185 FlyBaseID:FBgn0262559 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001034934.1 Gene:MDH1B / 130752 HGNCID:17836 Length:518 Species:Homo sapiens


Alignment Length:237 Identity:52/237 - (21%)
Similarity:80/237 - (33%) Gaps:44/237 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 NVNAGIIKDISNSIAKNCPKALVAIITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARA 179
            |:.|.|.|:......|.|...|...||:...........||....|:.......::..|..:|..
Human   111 NLGAHIEKEQEEEALKTCINPLQVWITSASAPACYNLIPILTSGEVFGMHTEISITLFDNKQAEE 175

  Fly   180 FIGHALGVDPQTVQIPVIGGHSGVT----------ILPVLSQSQ---------------PLFKGN 219
            .: .:|.|:.|.:..||:...|..|          ::.||..|.               ||.:..
Human   176 HL-KSLVVETQDLASPVLRSVSICTKVEEAFRQAHVIVVLDDSTNKEVFTLEDCLRSRVPLCRLY 239

  Fly   220 QDTIEK---LTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFAGSLLK---GLNGEKNVIECSYV 278
            ...|||   .:||:...|...|..|     ..|.|.|| .|.|.:::.   |:.||...|   ..
Human   240 GYLIEKNAHESVRVIVGGRTFVNLK-----TVLLMRYA-PRIAHNIIAVALGVEGEAKAI---LA 295

  Fly   279 QSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAAI 320
            :...|..::....::.|.......:.|.|...|.   .|:||
Human   296 RKLKTAPSYIKDVIIWGNISGNNYVDLRKTRVYR---YESAI 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mdh2NP_650696.1 MDH_glyoxysomal_mitochondrial 25..334 CDD:133422 52/237 (22%)
MDH1BNP_001034934.1 MDH_like 9..459 CDD:133431 52/237 (22%)

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