DRSC/TRiP Functional Genomics Resources

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Protein Alignment Non3 and Rpf2

DIOPT Version :9

Sequence 1:NP_650694.2 Gene:Non3 / 42183 FlyBaseID:FBgn0038585 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001099861.1 Gene:Rpf2 / 294436 RGDID:1306906 Length:306 Species:Rattus norvegicus


Alignment Length:298 Identity:138/298 - (46%)
Similarity:197/298 - (66%) Gaps:1/298 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKDLQALKKPLVKVLNRKN 66
            :|.::.||||::.|:.|..|||:|.|:.:..:.:.|......|...::|:.|||||...:..:||
  Rat     3 ALDKVLKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANATVTQVLRDVYALKKPYGVLYKKKN 67

  Fly    67 DITPFDDPSSLEFLTMKNDAALFTFGSTSKKRPDNIILGRIFENEVLDMFELGIKRYQAISEFKN 131
            ...||:|.:||||.:.|:|.:||.|||.:||||:|:::||:::..||||.||||:::.::.:.|.
  Rat    68 ITRPFEDQTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIEKFVSLKDIKT 132

  Fly   132 EKIGACVKPCLVFNGPKWAQTEELRRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVTDDMNILMR 196
            .|.....||.|:|.|..:..||:.|||:||.||.|:...|.::||.|:|:||.||..:. .:..|
  Rat   133 SKCPEGTKPMLIFAGDDFDVTEDYRRLKNLLIDFFRGPTVSNVRLAGLEYVLHFTALNG-KVYFR 196

  Fly   197 SYRILLKKSGQRTPRIELEEIGPSADFSIRRTKIASEDLYKQARKQPKQLKVGKKKNISTDALGN 261
            ||::||||||.|||||||||:|||.|..:|||.:||:||||.:.|.||.||..|:||||.|..|.
  Rat   197 SYKLLLKKSGCRTPRIELEEMGPSLDLVVRRTHLASDDLYKLSMKVPKALKPKKRKNISQDTFGT 261

  Fly   262 TKGRVHLGKQQTGSIQTRRVKALRKTPEEKKENRQRKK 299
            |.||:|:.||....:|||:||.|:|.|.|.....|.||
  Rat   262 TFGRIHMQKQDLSKLQTRKVKGLKKRPAENGVEDQGKK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Non3NP_650694.2 Brix 3..290 CDD:412658 134/286 (47%)
Rpf2NP_001099861.1 Brix 6..286 CDD:294606 131/280 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341753
Domainoid 1 1.000 177 1.000 Domainoid score I3503
eggNOG 1 0.900 - - E1_COG5106
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6404
Inparanoid 1 1.050 273 1.000 Inparanoid score I2907
OMA 1 1.010 - - QHG53948
OrthoDB 1 1.010 - - D434863at33208
OrthoFinder 1 1.000 - - FOG0005406
OrthoInspector 1 1.000 - - oto98869
orthoMCL 1 0.900 - - OOG6_102220
Panther 1 1.100 - - LDO PTHR12728
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3835
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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