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Protein Alignment mTerf5 and Mterf1

DIOPT Version :9

Sequence 1:	NP_650693.1	Gene:	mTerf5 / 42182	FlyBaseID:	FBgn0038584	Length:	560	Species:	Drosophila melanogaster
Sequence 2:	NP_445951.1	Gene:	Mterf1 / 85261	RGDID:	621318	Length:	374	Species:	Rattus norvegicus

Alignment Length:	267	Identity:	55/267 - (20%)
Similarity:	99/267 - (37%)	Gaps:	75/267 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   183 RELESETLTLKSLRQSLINAYLRERLQMD-DNDLQKLWRVYTRIRHKSFRAVQDTIELLTKEFNF 246
            ||:.:..|.:.::.:....::.|....:: :|:::.|..|  .:.||..      ..|||
  Rat   124 REIMASDLEIVNILERSPESFFRSNNNLNLENNIKFLCSV--GLTHKCL------CRLLT----- 175

  Fly   247 SAERLRKNSFLLYSE-----------------ADNVRRILREVPTIDSQDIREI----------- 283
            ||.|...||..|..:                 .|.||:|:.:.|:|..|..:.:
  Rat   176 SAPRTFSNSLNLNKQMVEFLQETGISLGHNNPTDFVRKIISKNPSILIQSTKRVKTNIEFLQSTF 240

  Fly   284 GFRRPKILMSTC-----------DSLKQTLQHVH----AFGISEDA----VLRCLEVLTLGP--- 326
            ...:..:|:..|           |..|:...::.    :.|.:|:.    ||..|.::.|..
  Rat   241 NLDKEDLLLLICGPGARILDLSNDCTKRNYTNIKKRLLSLGCTEEEVQKFVLSYLNMIFLSEKKF 305

  Fly   327 ----DTVLERLRDLQEIEEFQVLGTNPRILRLVHYQNKARLRLDYLNQLRVRCASLHILSCGSEA 387
                |.:||     ::|...|:| .|||:|....:..|.|:|........|..:|:.:||.....
  Rat   306 NDKIDCLLE-----EKISTSQIL-ENPRVLDSSIHTLKTRIRELAHAGYDVSTSSIALLSWSQRR 364

  Fly   388 F-AKFAR 393
            : ||..|
  Rat   365 YEAKLKR 371

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.