DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB8A and Rab3

DIOPT Version :10

Sequence 1:NP_005361.2 Gene:RAB8A / 4218 HGNCID:7007 Length:207 Species:Homo sapiens
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:196 Identity:98/196 - (50%)
Similarity:145/196 - (73%) Gaps:2/196 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
            :.:||:||||:||:|.||||..|||:::|:|.|.|:||:|||||::|:....||:||||||||||
  Fly    16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQ 80

Human    68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVS 132
            ||:|||||||||||||.:|:||:|||.||:::::|:..|:.::..:.:.:::|||||:.|:|.:|
  Fly    81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVIS 145

Human   133 KERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP--QGSNQGVKITPDQ 195
            .|||.:||...|::|.|||||.|:||:..|..|...|..||.:.|:.:..  .|..:|.::|...
  Fly   146 FERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQP 210

Human   196 Q 196
            |
  Fly   211 Q 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB8ANP_005361.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 91/165 (55%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 8/13 (62%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 15/16 (94%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 89/163 (55%)

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