DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB8A and Rab21

DIOPT Version :10

Sequence 1:NP_005361.2 Gene:RAB8A / 4218 HGNCID:7007 Length:207 Species:Homo sapiens
Sequence 2:NP_001036321.2 Gene:Rab21 / 3355163 FlyBaseID:FBgn0039966 Length:222 Species:Drosophila melanogaster


Alignment Length:175 Identity:67/175 - (38%)
Similarity:108/175 - (61%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRT 72
            ||.:|:|:..||||.::.|:.||.||:..:||:...|..|.:.| ||:|.:|.||||||||||..
  Fly    14 FKAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQERFHA 78

Human    73 ITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGE 137
            :...||||:.|.:||||||:..||..:::|:|.:.:....::..:|:|||.|:.::|.|:.:...
  Fly    79 LGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTDLEEQRAVTHDEAL 143

Human   138 KLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
            :.|...|.:::|||||.|..|...|..|.:.:..::.::....||
  Fly   144 QYARTVGAQYVETSAKENEGVAELFELLTQLMLEQLSQRQPDASP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB8ANP_005361.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 65/163 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)
Rab21NP_001036321.2 Rab21 14..176 CDD:133323 65/161 (40%)

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