DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB8A and Rab35

DIOPT Version :10

Sequence 1:NP_005361.2 Gene:RAB8A / 4218 HGNCID:7007 Length:207 Species:Homo sapiens
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:201 Identity:98/201 - (48%)
Similarity:141/201 - (70%) Gaps:17/201 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
            ||:.:|:|||||:||||||||:.:|.|||:|.|:.::|:|||:||||||::::|.|:||||||||
  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65

Human    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQ 130
            |||||||||:.||||..|:::|||:||.:||.|:|.|:..|:.:... |:|:::|||.|..|::.
  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129

Human   131 VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN-------------SP 182
            |..|..::.|....|:..|||||.||||||.|.::.|.:   :|.||..:             :|
  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQV---LDHKLRTSPNEQQKDTLHLKPNP 191

Human   183 QGSNQG 188
            :||..|
  Fly   192 KGSKGG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB8ANP_005361.2 Rab8_Rab10_Rab13_like 6..172 CDD:206659 89/165 (54%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 14/16 (88%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 96/199 (48%)

Return to query results.
Submit another query.