DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssdp and zgc:110158

DIOPT Version :9

Sequence 1:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001349511.1 Gene:zgc:110158 / 553590 ZFINID:ZDB-GENE-050522-195 Length:385 Species:Danio rerio


Alignment Length:451 Identity:240/451 - (53%)
Similarity:267/451 - (59%) Gaps:115/451 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGKSKTSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWWCV 65
            ||.|.|.:.||||:|||||||||||||||||||||:||||||||||||||||||||||||:||||
Zfish     1 MYAKGKGAVVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCV 65

  Fly    66 FWDLYCAAPERRDQCDHSSEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGGDG 129
            |||||||||:||:.|:|||||||||||                   :...|||| :|.||| .||
Zfish    66 FWDLYCAAPDRRETCEHSSEAKAFHDY-------------------SAAAAPSPVMGNMPP-NDG 110

  Fly   130 GPMGPGGPMGPNFF---PNSTMRPSPPTHASSPQPPP-----SQMMPGQPPFMGGPRYPGGPRPG 186
               .|||||.|.||   |.|  :|||  ||   ||||     ..|.|...||| .|||||||||.
Zfish   111 ---MPGGPMPPGFFQGPPGS--QPSP--HA---QPPPHNTSNPMMGPHGQPFM-SPRYPGGPRPS 164

  Fly   187 VRMQGMGNEFNGPP-----GQPMMPNSMDPTRPGGGM---GPMNPRMNPPRGPGGMGPMGYGG-- 241
            :||.      |.||     .||::|||:|||||.|..   |||  |||||||.|||||..|||  
Zfish   165 LRMP------NQPPVGVPGSQPLLPNSLDPTRPQGHPNMGGPM--RMNPPRGMGGMGPQNYGGMR 221

  Fly   242 --PGGMRGPAPGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSPGNY--GPGSNGPPGPGTP 302
              |..:.||     |||.|.| |.|||.| | ||.:|...||||||||||  .||..||  ||||
Zfish   222 PPPNSLGGP-----GMPGMNM-GPGGRGP-W-PNPNANSIAYSSSSPGNYVGPPGGGGP--PGTP 276

  Fly   303 IMPSPQDNTQG--------GPVGGPGDSMYALMKPEFPMGGGPDGGGGGGGPGGMGPMGG-GPNS 358
            |||||.|:|..        .|: |||.:     :|.||||.|||        |.||.||| .|:.
Zfish   277 IMPSPGDSTNSSENIYTMMNPI-GPGGN-----RPNFPMGPGPD--------GPMGGMGGMEPHH 327

  Fly   359 MGPVLNGGGGPDGSG-LDGM-KNSP-----ANGGPGTPREDSGSGMGDYNLGGFGGPGEND 412
            |       .|..||| :||: ||||     .|..|||||:|...|      |.|..|.:::
Zfish   328 M-------NGSLGSGDMDGLPKNSPNNMAGMNNPPGTPRDDGEMG------GNFLNPFQSE 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsdpNP_001262698.1 SSDP 81..393 CDD:282372 166/350 (47%)
zgc:110158NP_001349511.1 LisH 17..43 CDD:128913 24/25 (96%)
SSDP 81..362 CDD:398282 166/350 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596921
Domainoid 1 1.000 209 1.000 Domainoid score I2784
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 363 1.000 Inparanoid score I2140
OMA 1 1.010 - - QHG45948
OrthoDB 1 1.010 - - D387814at33208
OrthoFinder 1 1.000 - - FOG0001190
OrthoInspector 1 1.000 - - otm26256
orthoMCL 1 0.900 - - OOG6_107792
Panther 1 1.100 - - LDO PTHR12610
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X810
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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