DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ssdp and ssbp3

DIOPT Version :9

Sequence 1:	NP_001262698.1	Gene:	Ssdp / 42177	FlyBaseID:	FBgn0011481	Length:	509	Species:	Drosophila melanogaster
Sequence 2:	XP_031755812.1	Gene:	ssbp3 / 394816	XenbaseID:	XB-GENE-998011	Length:	396	Species:	Xenopus tropicalis

Alignment Length:	462	Identity:	230/462 - (49%)
Similarity:	258/462 - (55%)	Gaps:	104/462 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MYGKSKTSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWWCV 65
            |:.|.|.||||||.|||||||||||||||||||||:||||||||||||||||||||||||:||||
Frog     1 MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCV 65

  Fly    66 FWDLYCAAPERRDQCDHSSEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGGDG 129
            |||||||||||||.|:|||||||||||                   :...|||| ||.:|| .||
Frog    66 FWDLYCAAPERRDTCEHSSEAKAFHDY-------------------SAAAAPSPVLGNIPP-SDG 110

  Fly   130 GPMGPGGPMGPNFFPNSTMRPSPPTHASSPQPPPSQMMPGQPPFMGGPRYPGGPRPGVRMQGMGN 194
               .||||:.|.||........|..|:..|...|:.|.|...||| .|||.|||||.:|   |||
Frog   111 ---MPGGPIPPGFFQQGPPGSQPSPHSQPPPHNPNMMGPHSQPFM-SPRYAGGPRPHIR---MGN 168

  Fly   195 EFNGPPG-----QPMMPNSMDPTRPG-GGMGPMNPRMNPPRGPGGMGP----------MGYGGPG 243
            :   |||     ||::||||||||.| .|||....||||||..|.|||          ..||  .
Frog   169 Q---PPGSVPGSQPLLPNSMDPTRQGHPGMGGPMQRMNPPRSMGPMGPGPQSDPWLSLQNYG--S 228

  Fly   244 GMRGP--APGPGGMPPMGMGGAGGRPPQWQPNASAPLNAYSSSSPGNY--GPGSNGPPGPGTPIM 304
            |||.|  :.|||    |.||...|||  |....||....|||||||.|  .|||.||  ||||||
Frog   229 GMRPPPNSLGPG----MNMGPGSGRP--WPNPNSANSIPYSSSSPGTYVGPPGSGGP--PGTPIM 285

  Fly   305 PSPQDNTQGGPVGGPGDSMYALMKP--------EFPMGGGPDGGGGGGGPGGMGPMGG-GPNSMG 360
            |||.::|..      .|::|.::.|        .||||.|.|        |.||.||| .|:.|
Frog   286 PSPAESTNS------SDNIYTMINPVPPSGNRSNFPMGPGSD--------GPMGGMGGMEPHHM- 335

  Fly   361 PVLNGGGGPDGSG-LDGM-KNSPAN-----GGPGTPREDSGSGMGDYNLGGFGGPGENDQTESAA 418
                  .|..||| :||: ||||.|     ..|||||:|...|      |.|....:||..:.:.
Frog   336 ------NGSLGSGDMDGLPKNSPNNISGISNPPGTPRDDGELG------GNFLHSFQNDNRQYST 388

  Fly   419 ILKIKES 425
            .|.:..|
Frog   389 PLLLGRS 395

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ssdp	NP_001262698.1	SSDP	81..393	CDD:282372	150/348 (43%)
ssbp3	XP_031755812.1	LisH	17..43	CDD:128913	24/25 (96%)
ssbp3	XP_031755812.1	SSDP	81..369	CDD:398282	150/348 (43%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	207	1.000	Domainoid score	I2815
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H23411
Inparanoid	1	1.050	361	1.000	Inparanoid score	I2150
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D387814at33208
OrthoFinder	1	1.000	-	-		FOG0001190
OrthoInspector	1	1.000	-	-		oto102223
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X810
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.060