DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssdp and adn3

DIOPT Version :9

Sequence 1:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_588535.2 Gene:adn3 / 2538721 PomBaseID:SPCC1494.10 Length:964 Species:Schizosaccharomyces pombe


Alignment Length:714 Identity:124/714 - (17%)
Similarity:200/714 - (28%) Gaps:257/714 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SKTSAVPSDAQA---------REKLALYVYEYLLHVGAQKAAQTFLSEIRWE------------- 47
            :|.|...|.|.|         .|.|..|:|:|.:....::|||.||.|.:.:             
pombe    14 AKASQYESSAPASSSLGNSHPNESLDYYIYDYFVKHNFEEAAQAFLRESKIQIPKSSSSTAFSPS 78

  Fly    48 ----------KN----------------------------------------------------- 49
                      ||                                                     
pombe    79 NNNAPSPFPPKNSSLASPSKISESISGDRLYNHMSSAPSPNKKEETNVVHANEDISLDKRQSFGS 143

  Fly    50 -------ITLGEPPGFLHTWWCVFWDLYCAAPERRDQC-----DHSSEAKAFHDYGFVSSGYGVN 102
                   :::..|.|||..|:.:|||::.|...|.:..     |.|::.:.......:.:...| 
pombe   144 SSLPPSEVSINVPEGFLVEWFNIFWDVFSARVSRVNSTPIQLYDPSTQRQMARPMSNLQASQPV- 207

  Fly   103 GIGPGGPHNAGGPAPSPLGQMPPGGDGGPMGPGGPMGPNFFPNSTMRPS----PPTHA-SSPQ-- 160
               |....:.....|:|...:.|....|.: ...|..|...|::::..:    ||:|| .:|.  
pombe   208 ---PSSTFSRSAVVPNPSLPLNPSVLQGQV-MNNPTIPKGTPSTSIEGAKTSIPPSHAMQNPHNS 268

  Fly   161 -PPPSQMMPGQPPFMGGPRYPGGPRPGVRMQGMGNEFNGPPGQPMMPNS--MDPTRPGGGMGPMN 222
             |..:..:....|.......|..|.|.:.:         ||.  .:||:  |.|:.  ...|..:
pombe   269 FPASADRLQKNHPVQSSNFNPYTPAPSITV---------PPN--YIPNTAMMGPSY--SSFGDTD 320

  Fly   223 PRMNPPRGPGGMGPMGYGGPGGMRGPA-----------------------PGPGGMPP------- 257
            ||..    |.||||.......|...|.                       |.|..|..       
pombe   321 PRTY----PAGMGPNPTAARNGFYPPTPAQIHQLKAQQQHLQRQSKQMSEPAPINMKSNKDQQLQ 381

  Fly   258 ----MGMG-GAGGRPPQW---------QPN----------------ASAPLNAYS--SSSPGNYG 290
                .|:| ||..:..||         |||                .|:|.:.:.  ...|..|.
pombe   382 YVDFRGVGSGADLQKQQWNKSTSAEGLQPNGLVMRNFGDVRHQKLPTSSPPSQHPPVGQIPSQYL 446

  Fly   291 PGSNGPPGPG-TPI------------------MPSPQDNTQGGP---VGGPGDSMYALMKPEFPM 333
            |...|...|| |||                  .||..|:::..|   |..|....||   |..|.
pombe   447 PYQAGLKVPGNTPIPVKQVGGMPLQSPLPVSMKPSADDHSRATPTRSVEAPTLPSYA---PRHPT 508

  Fly   334 GGGPDGGGGGGGPGGMGPMGGGPNSMGPVLNGGGGPDGSGLDG---------------------- 376
                    ...|...|.|.........|.:.....|.....|.                      
pombe   509 --------QANGSRYMNPSTSRMTPQSPYMQNYYRPHAQMQDQNNMMSYMLSQQKAMEIAKSREM 565

  Fly   377 --MKNSPANGGPGTPREDSGSGMGDYNLG------GFGGPGENDQTESAAILKIKESMHEEAKRF 433
              .:|:........|.:.||....::::.      ..|....:|......:|:.:........|.
pombe   566 AIQRNTQTLSSGNQPPQQSGPNPNEFSMSMDPANMQQGNHALSDYHMQLMLLEEQNKKRLMMARQ 630

  Fly   434 EKDTD--HPDYFMPXQHHQQQQQQHQQHL-NTVAAAVAAVVAAAASNGSAAGSSSAASIAAAAL 494
            |:.|.  .|..:|. ::.....::|...: |..|..:...|..:|::.:.|.:.:|.|..:..:
pombe   631 EQGTGSLSPQSYMNSRYSVDVGKEHMSMIPNQTAPMIQPNVPVSANSPAQANTPAADSTKSGTI 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsdpNP_001262698.1 SSDP 81..393 CDD:282372 78/429 (18%)
adn3NP_588535.2 LisH 36..62 CDD:285685 10/25 (40%)
TSA <188..>396 CDD:281267 43/229 (19%)
Med15 360..>766 CDD:255446 59/346 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12610
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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