DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssdp and SSBP2

DIOPT Version :9

Sequence 1:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001381279.1 Gene:SSBP2 / 23635 HGNCID:15831 Length:381 Species:Homo sapiens


Alignment Length:470 Identity:225/470 - (47%)
Similarity:257/470 - (54%) Gaps:137/470 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGKSK--TSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWW 63
            ||||.|  :||||||:|||||||||||||||||||||:||||||||||||||||||||||||:||
Human     1 MYGKGKSNSSAVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWW 65

  Fly    64 CVFWDLYCAAPERRDQCDHSSEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGG 127
            ||||||||||||||:.|:|||||||||||                   :...|||| ||.:|| |
Human    66 CVFWDLYCAAPERRETCEHSSEAKAFHDY-------------------SAAAAPSPVLGNIPP-G 110

  Fly   128 DGGPMGPGGPMGPNFFPNSTMRPSPPTHASSPQPPPSQMMPGQPPFMGGPRYPGGPRPGVRM--Q 190
            ||.|:   ||:.|.||                           .||| .|||||||||.:|:  |
Human   111 DGMPV---GPVPPGFF---------------------------QPFM-SPRYPGGPRPPLRIPNQ 144

  Fly   191 GMGNEFNGPPG-QPMMPNSMDPTRPGG--GMGPMNPRMNPPRGPGGMGPMGYGGPGGMRGP--AP 250
            .:|    |.|| ||::|:.|||||..|  .||....||.||||...:||..||  |.||.|  |.
Human   145 ALG----GVPGSQPLLPSGMDPTRQQGHPNMGGPMQRMTPPRGMVPLGPQNYG--GAMRPPLNAL 203

  Fly   251 GPGGMPPMGMGGAGGRPPQWQPNASAPLNA----YSSSSPGNYGPGS----------------NG 295
            |..|||.|.||..||||  | ||   |.||    |||:|||||...|                :|
Human   204 GGPGMPGMNMGPGGGRP--W-PN---PTNANSIPYSSASPGNYVKCSEVVASWRGKKERIRRKSG 262

  Fly   296 PPG----PGTPIMPSPQDNTQGGPVGGPGDSMYALM--------KPEFPMGGGPDGGGGGGGPGG 348
            |||    |||||||||.|:|..      ||:||.||        :|.|||           |||.
Human   263 PPGGGGPPGTPIMPSPADSTNS------GDNMYTLMNAVPPGPNRPNFPM-----------GPGS 310

  Fly   349 MGPMGGGPNSMGPVLNGGGGPDGSG-LDGM-KNSPAN----GGPGTPREDSGSGMGDYNLGGFGG 407
            .|||||........:||.   .||| :|.: ||||.|    ..|||||:|...|      |.|..
Human   311 DGPMGGLGGMESHHMNGS---LGSGDMDSISKNSPNNMSLSNQPGTPRDDGEMG------GNFLN 366

  Fly   408 PGENDQTESAAILKI 422
            |.:::....:..:.:
Human   367 PFQSESYSPSMTMSV 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsdpNP_001262698.1 SSDP 81..393 CDD:282372 147/357 (41%)
SSBP2NP_001381279.1 LisH 19..45 CDD:128913 24/25 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 194 1.000 Domainoid score I3173
eggNOG 1 0.900 - - E1_KOG4594
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 351 1.000 Inparanoid score I2275
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45948
OrthoDB 1 1.010 - - D387814at33208
OrthoFinder 1 1.000 - - FOG0001190
OrthoInspector 1 1.000 - - otm40276
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12610
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5390
SonicParanoid 1 1.000 - - X810
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.970

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