DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssdp and Y53F4B.5

DIOPT Version :9

Sequence 1:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_497090.1 Gene:Y53F4B.5 / 190208 WormBaseID:WBGene00013152 Length:144 Species:Caenorhabditis elegans


Alignment Length:19 Identity:11/19 - (57%)
Similarity:11/19 - (57%) Gaps:1/19 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 GGPHNAGGPAPSPLGQMPP 125
            ||| ..|||...||..|||
 Worm    16 GGP-PPGGPQDVPLQSMPP 33

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsdpNP_001262698.1 SSDP 81..393 CDD:282372 11/19 (58%)
Y53F4B.5NP_497090.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001190
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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