Protein Alignment Ssdp and sam-10

DIOPT Version :10

• Sequence 1: NP_001262698.1
• Gene: Ssdp / 42177
• FlyBaseID: FBgn0011481
• Length: 509
• Species: Drosophila melanogaster
• Sequence 2: NP_001254379.1
• Gene: sam-10 / 174975
• WormBaseID: WBGene00012990
• Length: 455
• Species: Caenorhabditis elegans
• Alignment Length: 482
• Identity: 165/482 - (34%)
• Similarity: 204/482 - (42%)
• Gaps: 98/482 - (20%)

  Fly     4 KSKTSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEK--------NITLGEPPGFLH 60
            :.:..::.|:..||::|..|:||||...||.|.|:||..|:....        |.|......||.
 Worm     7 QQQQQSLASEMTARDRLTSYIYEYLQQTGASKTAETFKEEVLSTNPAAGLAAANSTKLSDKSFLL 71

  Fly    61 TWWCVFWDLYCAAPERRDQ--CDHSSEAKAFHDYGFVSSGYGVNG-IGP--------GGPHNAGG 114
            .||.:|||||.|||||||.  ...|:|||.||: ..:....|:|| ..|        ||...|.|
 Worm    72 EWWLLFWDLYSAAPERRDAGGDPFSAEAKYFHE-AMIGMPPGMNGHFAPPPMGMEMMGGHPGAFG 135

  Fly   115 PAPSPLGQMPPGGDGGPMGPGG-PMG--PNFFPNSTM-RPSPPTHASSPQPPPSQMMPGQPPFMG 175
            ...:| |:||||.    |.||| |.|  |.|.|:..: |.:|......|.||..|..||.   :|
 Worm   136 GRFAP-GRMPPGA----MAPGGMPPGAFPMFPPDPRLQRMAPNQGMRMPPPPVGQPFPGA---VG 192

  Fly   176 GPRYPGGPRPGVRMQGMGN-EF-NGPPGQPMMPNSMDPTRPGGGMGPMNPRMNPPRGPGGMGPMG 238
            .|| |.||...:.|.||.. :| .|||             ||||..|. |..:   |.|||.|.|
 Worm   193 MPR-PVGPGAPMDMSGMQRFDFMGGPP-------------PGGGAQPF-PGAS---GSGGMMPNG 239

  Fly   239 YGGPGGMRGPAPG--PGGMPP-MGMGGAGGRPPQWQPNASA-PLNAYSSSSPGNYGPGSNGP--- 296
            ......:..|:.|  |..||| |||      ||....::|| |....|...|.:.||.:..|
 Worm   240 AHPHMSLNSPSMGVPPADMPPFMGM------PPMPPTSSSAMPFGMSSDHQPMSAGPAAAAPGAT 298

  Fly   297 --PGPGTPIM----PSPQD-----NTQGGPVGGPGDSMYALMKP--EFPMGG---------GPDG 339
              .|||||.|    |.|..     .|..|.||.|......|.:|  |....|         .|.|
 Worm   299 TAGGPGTPGMIGSVPGPGSVPQVATTSVGSVGTPSSIGQQLHQPKQEITTNGEEIMKTEALTPTG 363

  Fly   340 GGGGGGPGGMGPMGGGPNSMGPVLNGGGGPDGSGLDGMKNSPANGGPGTPREDSGSG-MGDYNL- 402
            |||||......|......||     .|||| ||......:...|..||||..:..|. |.:..|
 Worm   364 GGGGGSVPPPPPAATAAVSM-----NGGGP-GSAPGSAHSVNNNVNPGTPGSNPLSNPMSNPPLS 422

  Fly   403 GGFGGPGEND---QTESAAILKIKESM 426
            .|...||.||   :.::..|.||:|.:
 Worm   423 SGPPPPGSNDAFGKDDNGEISKIREGL 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ssdp	NP_001262698.1	SSDP	81..393	CDD:461334	119/355 (34%)
sam-10	NP_001254379.1	LisH	20..46	CDD:128913	13/25 (52%)
		PHA03378	<110..206	CDD:223065	37/104 (36%)