DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssdp and ssbp2

DIOPT Version :9

Sequence 1:NP_001262698.1 Gene:Ssdp / 42177 FlyBaseID:FBgn0011481 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_017946847.1 Gene:ssbp2 / 100216109 XenbaseID:XB-GENE-987286 Length:395 Species:Xenopus tropicalis


Alignment Length:464 Identity:230/464 - (49%)
Similarity:266/464 - (57%) Gaps:111/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYGKSKTSAVPSDAQAREKLALYVYEYLLHVGAQKAAQTFLSEIRWEKNITLGEPPGFLHTWWCV 65
            ||.|.|:::||||:|||||||||||||||||||||:||||||||||||||||||||||||:||||
 Frog     1 MYAKGKSNSVPSDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCV 65

  Fly    66 FWDLYCAAPERRDQCDHSSEAKAFHDYGFVSSGYGVNGIGPGGPHNAGGPAPSP-LGQMPPGGDG 129
            ||||||||||||:.|:|||||||||||                   :...|||| ||.||| |||
 Frog    66 FWDLYCAAPERRETCEHSSEAKAFHDY-------------------SAAAAPSPVLGNMPP-GDG 110

  Fly   130 GPMGPGGPMGPNFF---PNSTMRPSPPTHASS-PQPPPSQMM-PGQPPFMGGPRYPGGPRPGVRM 189
            .|:   ||:.|.||   |.|.:    ..||.. |....:.|: |...||| .|||||||||.:|:
 Frog   111 MPV---GPVPPGFFQGPPGSQL----SLHAQHLPHNLSNSMIGPQNQPFM-SPRYPGGPRPPLRI 167

  Fly   190 --QGMGNEFNGPPG-QPMMPNSMDPTRPGGG---MGPMNPRMNPPRGPGGMGP--------MGYG 240
              ||:|    |.|| |.::|:.|||:|..|.   .|||. ||:.|||...:||        ..||
 Frog   168 PNQGLG----GVPGSQTLLPSGMDPSRQQGHPNMAGPMQ-RMSGPRGMVPLGPQSDPWLSLQSYG 227

  Fly   241 GPGGMRGPAPGPGG--MPPMGMGGAGGRPPQWQPNASAPLNA----YSSSSPGNY--GPGSNGPP 297
              ||||.|....||  ||.|.||..||||  | ||   |.||    |||:|||||  .||..|| 
 Frog   228 --GGMRPPLNALGGPAMPGMNMGPGGGRP--W-PN---PGNANSIPYSSASPGNYVGPPGGGGP- 283

  Fly   298 GPGTPIMPSPQDNTQGGPVGGPGDSMYALM--------KPEFPMGGGPDGGGGGGGPGGMGPMGG 354
             |||||||||.|:|..      ||:||.||        :|.||||.|.|  |...|.|||.|.. 
 Frog   284 -PGTPIMPSPADSTNS------GDNMYTLMNAVPPGGNRPNFPMGPGSD--GPMSGLGGMEPHH- 338

  Fly   355 GPNSMGPVLNGGGGPDGSG-LDGM-KNSPAN----GGPGTPREDSGSGMGDYNLGGFGGPGENDQ 413
                    :||.   .||| :|.: ||||.|    ..|||||:|...|      |.|..|.:|:.
 Frog   339 --------INGS---LGSGDMDSISKNSPNNMNLSNQPGTPRDDGEMG------GNFLNPFQNES 386

  Fly   414 TESAAILKI 422
            ...:..:.:
 Frog   387 YSPSMTMSV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsdpNP_001262698.1 SSDP 81..393 CDD:282372 154/353 (44%)
ssbp2XP_017946847.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 207 1.000 Domainoid score I2815
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 361 1.000 Inparanoid score I2150
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387814at33208
OrthoFinder 1 1.000 - - FOG0001190
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12610
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5390
SonicParanoid 1 1.000 - - X810
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.190

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