DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp5 and actr5

DIOPT Version :9

Sequence 1:NP_001262697.1 Gene:Arp5 / 42173 FlyBaseID:FBgn0038576 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_998653.1 Gene:actr5 / 406809 ZFINID:ZDB-GENE-040426-2877 Length:592 Species:Danio rerio


Alignment Length:642 Identity:214/642 - (33%)
Similarity:337/642 - (52%) Gaps:125/642 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITN 71
            :|:||||::||.||| |..|:      |..||...:..||.|.|:|       ....||||||.|
Zfish    35 VVVDNGSFQCRAGWS-SGAPE------LDNPRLVFRPAAARSRGAA-------RGGAQVGNDIPN 85

  Fly    72 IEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNEL 136
            .|.:|..|||.|:|:.:.|::.||.:|||||..:|.:.|.:::||:::||...||..|||.|:||
Zfish    86 PEPLRWTLKSAFDRDTVVNFDIQELVFDYIFMHLGINTQGRVEHPLVVTEPACNPLQCRQMMSEL 150

  Fly   137 LFECYGIPSVSYGIDALYSWKHHQQKQKNI---SDALIISFGYSTTHVIPVLDGKLQLEHVRRLN 198
            ||||||:|.|:||:|:|:|.  ||....:.   |.||::|.|:..:||:||::|:|...:.:|:|
Zfish   151 LFECYGVPRVAYGVDSLFSL--HQNSSADAGAPSTALVLSSGHHCSHVLPVINGRLDAVNCKRVN 213

  Fly   199 VGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEELVQWAQMDYYDEHIMKIQ 263
            :||.....|..||:|:|||.:..:||:||||:|:|:|.:|||||:.||.:|...::|:..:.::|
Zfish   214 LGGGQAAAYYQRLLQLKYPANQASITLSRMEELLHQHSYIAVDYQNELEKWRSPEFYESEVHRVQ 278

  Fly   264 LPYNAVTATNAMLTAEQKQEKRRELAHRLLDIKKNREQEKLREDEQQLFVYNKLRQLYEQKKLDK 328
            ||::..:| ...::||::.|:|.:...|:.:....|.:|::.||:::|.....:::|.|...|:.
Zfish   279 LPFSGRSA-GVCVSAEERSERRAQQLRRIQETNSRRREERILEDQKRLDTLLAVQELLEDGALEL 342

  Fly   329 FERALQQQQIGTLEDLDSLIATINSRIKRAQERAQSGPRPSKQQERLNKMPKPPEGMSQADWLAE 393
            |.|:|.:..:.:.|:|.|.|..::.               |.||.||                  
Zfish   343 FHRSLVELNMDSAEELQSYIHKLSL---------------SLQQHRL------------------ 374

  Fly   394 LQGKREKILGRKQARQQQRSEQAKRHTHAAQERMRIISSLAKNEKRRKANGEEEDDGFGMNDNDW 458
                             .|:|.|:... :|.|...:.:.|.:||:..|.:...:           
Zfish   375 -----------------LRAETAEVEP-SADEGNELEAELNENEEPGKPSSTAQ----------- 410

  Fly   459 DVYKRINRYNDDSDSDADNEKLMQFDKILNHYDANTDGNSNVPPQSAAENYQLHFGVENIRVPEV 523
                                                      |..:.||.:||..|.|.:||||:
Zfish   411 ------------------------------------------PMFNVAEYHQLFVGTERLRVPEI 433

  Fly   524 LFQPSMIGCSEAGLAELIAFVLKLFPAAEQQRLVEHVYLTGGCAQFKGLKERLIKELMEMRPFQS 588
            :||||:||..:.||.|.:.|||:.:...:|:.||.:|:||||..|:.|:|||:.:||:.:|||||
Zfish   434 IFQPSLIGEEQMGLMETLQFVLEQYSLEQQEALVRNVFLTGGNLQYPGVKERVERELLAIRPFQS 498

  Fly   589 KFAIYESDEPTLSAWLGACVHA-GEPTFGQTLTTRQDHQEHGREFFREHTASNIFYP 644
            .|.:..:..|.|.:|.|||..| ..|.......:|||::|.|.|:..||.||||:.|
Zfish   499 HFKVSVAGRPALDSWFGACDWALRSPADAPGWISRQDYEEKGGEYLSEHCASNIYIP 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp5NP_001262697.1 COG5277 1..637 CDD:227602 208/633 (33%)
actr5NP_998653.1 NBD_sugar-kinase_HSP70_actin 38..548 CDD:302596 207/630 (33%)
ACTIN 38..540 CDD:214592 204/622 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577974
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6818
Inparanoid 1 1.050 269 1.000 Inparanoid score I2998
OMA 1 1.010 - - QHG54909
OrthoDB 1 1.010 - - D178343at33208
OrthoFinder 1 1.000 - - FOG0005644
OrthoInspector 1 1.000 - - oto39333
orthoMCL 1 0.900 - - OOG6_104278
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4046
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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